PROGRAM
SESSION I: INTRODUCTION TO SURVIVAL ANALYSIS
- Introduction
- The problem of survival analysis
- The need for specific distributions
- Answering specific kinds of questions
- Censoring
- Right-censoring (withdrawal from study)
- Left-censoring
- Truncation
- Left-truncation (delayed entry)
- Right-truncation
- Gaps
- Survival analysis
- The survivor and hazard functions
- Hazard models
- Parametric models
- Semiparametric models
- Nonparametric estimators
- Analysis time (time at risk)
- Summary
SESSION II: SETTING AND SUMMARIZING SURVIVAL DATA
- The purpose of the stset command
- The desired format—Introduction to stset
- (st) Setting your data
- The syntax of the stset command
- Specifying analysis time
- Specifying what constitutes failure
- Specifying when subjects exit from the analysis
- Specifying when subjects enter the analysis
- Specifying the subject ID variable
- Handling gaps
- After (st) setting your data
- Look at stset‘s output
- Use stdescribe
- Use stvary
- Perhaps use stfill
- Example: Hip fracture data
- Appendices
- Dates
- Other formats
- Convenience options
SESSION III: SETTING AND SUMMARIZING SURVIVAL DATA
- Nonparametric estimation
- The Kaplan–Meier product-limit estimator of the survivor curve
- Calculation of the Kaplan–Meier survivor curve
- Censored observations
- Delayed entry
- Gaps
- Properties of the Kaplan–Meier estimator
- The sts graph command
- The sts list command
- The stsum command
- The Nelson–Aalen estimator of the cumulative hazard
- Alternative estimators of the survivor and cumulative hazard functions
- Comparing survival experience
- The log-rank test
- The Wilcoxon test
- The Tarone–Ware test
- The Peto–Peto–Prentice test
- The Fleming–Harrington test
- Test for trend across ordered groups
- The Cox test
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SESSION IV: REGRESSION MODELS — COX PROPORTIONAL HAZARDS
- Introduction
- The Cox model has no intercept
- Interpreting coefficients
- The effect of units on coefficients
- The baseline hazard and related functions
- The effect of units on the baseline functions
- Summary of stcox command
- The calculation of results
- No tied failures
- Tied failures
- The marginal calculation
- The partial calculation
- The Breslow approximation
- The Efron approximation
- Summary
- Stratified analysis
- Obtaining coefficient estimates
- Obtaining the baseline functions
- Modeling
- Indicator variables
- Categorical variables
- Continuous variables
- Interactions
- Time-varying variables
- Using stcox with option tvc()
- Using stsplit
- Testing the proportional-hazards assumption
- Tests based on reestimation
- Test based on Schoenfeld residuals
- Graphical methods
- Residuals
- Determining functional form
- Assessing goodness of fit
- Finding outliers and influential points
SESSION V: REGRESSION MODELS — PARAMETRIC SURVIVAL MODELS
- Introduction
- Classes of parametric models
- Parametric proportional-hazards models
- Accelerated failure-time models
- Maximum likelihood estimation for parametric models
- A survey of parametric regression models in Stata
- Exponential regression
- Exponential regression in the PH formulation
- Exponential regression in the AFT formulation
- Weibull regression
- Weibull regression in the PH formulation
- Weibull regression in the AFT formulation
- Gompertz regression (PH formulation)
- Lognormal regression (AFT formulation)
- Loglogistic regression (AFT formulation)
- Generalized log-gamma regression (AFT formulation)
- Exponential regression
- Choosing among parametric models
- Nested models
- Nonnested models
- Stratified models
- Use of predict after streg
- Predicting time of failure
- Predicting the hazard and related functions
- Calculating residuals
- Use of stcurve after streg